Update packages file for version 40660

Signed-off-by: clrbuilder <clrbuilder@intel.com>

Makefile.toplevel

@@ -126,11 +126,17 @@ endif
 pull: ${PULL_PKGS}
 
 #help clean-pkgs-dir: For packages that are no longer present in the distro,
-#help removes the associated package repos from the ./packages tree
+#help removes the associated package repos from the ./packages tree and stores
+#help it in packages_old. If it already exists in packages_old, skip it.
 clean-pkgs-dir: $(PACKAGES_FILE)
 	@for p in ${PKGS_ORPHANED}; do \
-		echo "Removing $$p from packages, it is no longer in common/packages."; \
-		rm -rf packages/$$p; \
+		mkdir -p packages_old; \
+		if [ -d "packages_old/$$p" ]; then \
+			echo "packages_old/$$p already exists, not touching it"; \
+		else \
+			echo "Moving $$p from packages to packages_old, as it is no longer in common/packages."; \
+			mv packages/$$p packages_old/$$p; \
+		fi; \
 	done
 	@echo "packages directory cleaned";
 

packages

@@ -44,8 +44,8 @@ PyMySQL
 PyQt5
 PySocks
 PyYAML
+QAT-ZSTD-Plugin
 QAT_engine
-QGIS
 QXlsx
 R
 R-AER
@@ -126,6 +126,7 @@ R-NMOF
 R-PKI
 R-ParamHelpers
 R-PerformanceAnalytics
+R-QuickJSR
 R-R.cache
 R-R.methodsS3
 R-R.oo
@@ -160,6 +161,7 @@ R-RcppProgress
 R-RcppRoll
 R-RcppTOML
 R-Rdpack
+R-RhpcBLASctl
 R-Rmpfr
 R-Rmpi
 R-Rserve
@@ -226,6 +228,7 @@ R-bench
 R-benchr
 R-betareg
 R-bibtex
+R-bigD
 R-biglm
 R-binGroup
 R-bindr
@@ -245,6 +248,7 @@ R-bridgesampling
 R-brio
 R-brms
 R-broom
+R-broom.helpers
 R-broom.mixed
 R-bslib
 R-bvls
@@ -457,6 +461,7 @@ R-ggplot2
 R-ggplot2movies
 R-ggrepel
 R-ggridges
+R-ggstats
 R-ggvis
 R-gh
 R-git2r
@@ -528,6 +533,7 @@ R-kableExtra
 R-keras
 R-kernlab
 R-kimisc
+R-kit
 R-klaR
 R-kmi
 R-knitr
@@ -636,6 +642,7 @@ R-mvnfast
 R-mvnormtest
 R-mvoutlier
 R-mvtnorm
+R-nanoarrow
 R-natserv
 R-ncbit
 R-ncdf4
@@ -907,6 +914,7 @@ R-statmod
 R-statnet.common
 R-stringdist
 R-stringi
+R-stringmagic
 R-stringr
 R-strucchange
 R-styler
@@ -997,6 +1005,7 @@ R-winch
 R-withr
 R-wk
 R-worrms
+R-writexl
 R-xfun
 R-xgboost
 R-xml2
@@ -1187,6 +1196,7 @@ buildreq-meson
 buildreq-nginx
 buildreq-php
 buildreq-qmake
+buildreq-qt6
 buildreq-scons
 buildx
 byobu
@@ -1207,9 +1217,10 @@ cantarell-fonts
 cantata
 cantor
 capnproto
+capslock
 capstone
-caribou
 casync
+catch2
 ccache
 ccid
 cdparanoia
@@ -1250,6 +1261,7 @@ clr-installer
 clr-man-pages
 clr-network-troubleshooter
 clr-one-shot-updates
+clr-optimized-link-scripts
 clr-power-tweaks
 clr-python-timestamp
 clr-pyversion-strip
@@ -1277,6 +1289,7 @@ cogl
 coinmp
 collectd
 collectl
+colm
 colord
 colord-gtk
 colordiff
@@ -1304,9 +1317,9 @@ compat-pangomm-soname14
 compat-protobuf-soname29
 compat-re2-soname10
 compat-readline-soname5
+compat-tbb-soname2
 compat-tiff-soname5
 component
-compute-image-packages
 configobj
 confuse
 conky
@@ -1339,7 +1352,6 @@ cups-bjnp
 cups-filters
 cups-pk-helper
 curl
-custom_inherit
 cycler
 cyrus-sasl
 dapl
@@ -1396,7 +1408,9 @@ dotconf
 double-conversion
 dovecot
 doxygen
+dpcpp-compiler
 dpdk
+draco
 dracut
 dragon
 dragonbox
@@ -1742,7 +1756,6 @@ indent
 indi
 inetutils
 inih
-iniparse
 init-rdahead
 inkscape
 innoextract
@@ -1905,7 +1918,9 @@ kimap
 kinfocenter
 kinit
 kio
+kio-admin
 kio-extras
+kirigami-addons
 kirigami2
 kitemmodels
 kitemviews
@@ -2092,7 +2107,10 @@ libdatrie
 libdazzle
 libdbusmenu
 libdbusmenu-qt
+libdecor
 libdeps
+libdex
+libdisplay-info
 libdmx
 libdnf
 libdrm
@@ -2124,6 +2142,7 @@ libftdi1
 libgcrypt
 libgd
 libgdata
+libgedit-amtk
 libgee
 libgeotiff
 libgit2
@@ -2172,6 +2191,7 @@ libkscreen
 libksieve
 libksysguard
 liblangtag
+libliftoff
 liblogging
 libmaxminddb
 libmbim
@@ -2213,6 +2233,7 @@ libopenzwave
 liborcus
 libosinfo
 libpagemaker
+libpanel
 libpcap
 libpciaccess
 libpeas
@@ -2237,6 +2258,7 @@ libreoffice
 librepo
 libreswan
 librevenge
+librist
 librsvg
 librtlsdr
 librttopo
@@ -2337,7 +2359,6 @@ linux-lts2020
 linux-lts2021
 linux-ltscurrent
 linux-ltsprev
-linux-oracle
 linux-preempt-rt
 linux-tools
 linuxptp
@@ -2346,6 +2367,7 @@ lldpd
 llvm
 llvm14
 llvm15
+llvm16
 lm-sensors
 lmdb
 logrotate
@@ -2381,8 +2403,10 @@ make
 man-db
 man-pages
 man-pages-posix
+mandoc
 marble
 mariadb
+mbedtls
 mc
 mccabe
 mcelog
@@ -2450,6 +2474,7 @@ mosquitto
 motd-update
 motif
 mozjs102
+mozjs115
 mozjs91
 mpc
 mpfr
@@ -2486,6 +2511,7 @@ ndctl
 ndpi
 neofetch
 neomutt
+neon
 neovim
 net-snmp
 net-tools
@@ -2521,7 +2547,6 @@ nlopt
 nmap
 nodejs
 nose-parameterized
-nosexcover
 not-ffmpeg
 notmuch
 noto-cjk
@@ -2535,17 +2560,16 @@ nss
 nss-altfiles
 nss-pam-ldapd
 ntfs-3g
-ntlm-auth
 ntopng
 ntp
 numactl
 numatop
 numlockx
 numpy-stl
+nut
 nv-codec-headers
 nvme-cli
 oath-toolkit
-obs-studio
 ocaml
 ocamlbuild
 ocl-icd
@@ -2575,8 +2599,6 @@ openjpeg
 openldap
 openmpi
 openpace
-openscad
-openshot-qt
 opensm
 openssh
 openssl
@@ -2596,6 +2618,7 @@ ostree
 otp
 oxygen
 oxygen-icons5
+oxygen-sounds
 p11-kit
 p7zip
 pacrunner
@@ -2768,10 +2791,10 @@ perl-Crypt-Rijndael
 perl-Crypt-SSLeay
 perl-Crypt-URandom
 perl-Curses
+perl-DBD-MariaDB
 perl-DBD-Pg
 perl-DBD-SQLite
 perl-DBD-SQLite2
-perl-DBD-mysql
 perl-DBI
 perl-DBICx-TestDatabase
 perl-DBIx-Class
@@ -2932,6 +2955,7 @@ perl-Geo-Distance
 perl-Geo-IP
 perl-Geo-IPfree
 perl-Getopt-Euclid
+perl-Getopt-Long
 perl-Getopt-Long-Descriptive
 perl-Getopt-Long-Modern
 perl-Getopt-Tabular
@@ -3306,6 +3330,7 @@ perl-Test-Deep
 perl-Test-DiagINC
 perl-Test-Differences
 perl-Test-Exception
+perl-Test-ExpectAndCheck
 perl-Test-FailWarnings
 perl-Test-Fatal
 perl-Test-File
@@ -3475,16 +3500,12 @@ phoronix-test-suite
 php
 php-APCu
 php-Bitset
-php-Molten
-php-PDO_SQLANYWHERE
 php-SeasClick
 php-SeasLog
 php-Xdebug
-php-Yaf
 php-ahocorasick
 php-apfd
 php-ast
-php-componere
 php-crypto
 php-datadog_trace
 php-dbase
@@ -3493,7 +3514,6 @@ php-ds
 php-eio
 php-ev
 php-gRPC
-php-gender
 php-geospatial
 php-gnupg
 php-hprose
@@ -3514,10 +3534,8 @@ php-oauth
 php-parle
 php-pcov
 php-proctitle
-php-propro
 php-protobuf
 php-psr
-php-radius
 php-raphf
 php-rdkafka
 php-redis
@@ -3525,8 +3543,6 @@ php-scrypt
 php-stomp
 php-svm
 php-sync
-php-taint
-php-timecop
 php-timezonedb
 php-trader
 php-uopz
@@ -3535,7 +3551,6 @@ php-xattr
 php-xlswriter
 php-xxtea
 php-yaml
-php-yar
 php-zmq
 picmi
 picocom
@@ -3708,7 +3723,6 @@ pypi-blockdiag
 pypi-bokeh
 pypi-boolean.py
 pypi-booleanoperations
-pypi-boto
 pypi-bowler
 pypi-bracex
 pypi-branca
@@ -3768,7 +3782,6 @@ pypi-compreffor
 pypi-configargparse
 pypi-configparser
 pypi-cons
-pypi-constantly
 pypi-contextlib2
 pypi-contextvars
 pypi-contourpy
@@ -3787,19 +3800,18 @@ pypi-cssselect
 pypi-cssselect2
 pypi-cu2qu
 pypi-curio
-pypi-cve_bin_tool
 pypi-cvss
 pypi-cxxfilt
 pypi-cython
 pypi-cytoolz
 pypi-dacite
 pypi-dask
-pypi-dataclasses
 pypi-datetime
 pypi-debugpy
 pypi-decorator
 pypi-deepmerge
 pypi-deepspeed
+pypi-dep_logic
 pypi-deprecated
 pypi-deprecation
 pypi-devpi_client
@@ -3820,7 +3832,6 @@ pypi-django_appconf
 pypi-django_babel
 pypi-django_compressor
 pypi-django_discover_runner
-pypi-django_nose
 pypi-dkimpy
 pypi-dnacentersdk
 pypi-dns_lexicon
@@ -3866,7 +3877,7 @@ pypi-flake8
 pypi-flake8_blind_except
 pypi-flake8_class_newline
 pypi-flake8_docstrings
-pypi-flake8_import_order
+pypi-flake8_isort
 pypi-flaky
 pypi-flask
 pypi-flatbuffers
@@ -3884,7 +3895,6 @@ pypi-ftfy
 pypi-funcparserlib
 pypi-future
 pypi-gast
-pypi-gcs_oauth2_boto_plugin
 pypi-gevent
 pypi-geventhttpclient
 pypi-ghp_import
@@ -3905,7 +3915,6 @@ pypi-google_cloud_core
 pypi-google_cloud_secret_manager
 pypi-google_cloud_storage
 pypi-google_crc32c
-pypi-google_pasta
 pypi-google_reauth
 pypi-google_resumable_media
 pypi-googleapis_common_protos
@@ -3921,7 +3930,6 @@ pypi-grpcio_health_checking
 pypi-grpcio_reflection
 pypi-grpcio_tools
 pypi-gssapi
-pypi-gsutil
 pypi-gtts_token
 pypi-gunicorn
 pypi-h11
@@ -3953,6 +3961,7 @@ pypi-hyperframe
 pypi-hyperlink
 pypi-hypothesis
 pypi-icalendar
+pypi-icecream
 pypi-identify
 pypi-idna
 pypi-idna_ssl
@@ -3976,7 +3985,6 @@ pypi-invoke
 pypi-iocapture
 pypi-ipaddress
 pypi-ipdb
-pypi-ipdbplugin
 pypi-ipykernel
 pypi-ipyparallel
 pypi-ipython
@@ -4005,7 +4013,6 @@ pypi-jinxed
 pypi-jmespath
 pypi-joblib
 pypi-josepy
-pypi-jpype1
 pypi-jsmin
 pypi-json5
 pypi-jsondiff
@@ -4021,7 +4028,6 @@ pypi-jupyter_console
 pypi-jupyter_core
 pypi-jupyter_events
 pypi-jupyter_lsp
-pypi-jupyter_nbgallery
 pypi-jupyter_packaging
 pypi-jupyter_server
 pypi-jupyter_server_fileid
@@ -4031,12 +4037,10 @@ pypi-jupyter_server_ydoc
 pypi-jupyter_sphinx
 pypi-jupyter_ydoc
 pypi-jupyterlab
-pypi-jupyterlab_launcher
 pypi-jupyterlab_link_share
 pypi-jupyterlab_pygments
 pypi-jupyterlab_server
 pypi-jupyterlab_widgets
-pypi-jupytext
 pypi-jxmlease
 pypi-kcc
 pypi-kerberos
@@ -4053,6 +4057,7 @@ pypi-lazy
 pypi-lazy_loader
 pypi-lazy_object_proxy
 pypi-ldap3
+pypi-levenshtein
 pypi-libarchive_c
 pypi-libevdev
 pypi-license_expression
@@ -4061,12 +4066,13 @@ pypi-linkchecker
 pypi-linkify_it_py
 pypi-livereload
 pypi-llfuse
+pypi-locate
 pypi-locket
 pypi-logical_unification
 pypi-logilab_common
+pypi-looseversion
 pypi-lxml
 pypi-lz4
-pypi-m2r
 pypi-macholib
 pypi-mako
 pypi-markdown
@@ -4121,7 +4127,6 @@ pypi-nbconvert
 pypi-nbformat
 pypi-nbsphinx
 pypi-nbval
-pypi-ncclient
 pypi-ndg_httpsclient
 pypi-neat_python
 pypi-nest_asyncio
@@ -4129,14 +4134,12 @@ pypi-netapp_lib
 pypi-netdisco
 pypi-netifaces
 pypi-networkx
+pypi-nh3
 pypi-nibabel
 pypi-nltk
 pypi-nocasedict
 pypi-nocaselist
 pypi-nodeenv
-pypi-nose
-pypi-nose_timer
-pypi-notebook
 pypi-notebook_shim
 pypi-numpoly
 pypi-numpy
@@ -4173,7 +4176,6 @@ pypi-pastel
 pypi-patatt
 pypi-pathlib2
 pypi-pathspec
-pypi-pathtools
 pypi-patsy
 pypi-pbr
 pypi-pdfminer.six
@@ -4257,7 +4259,7 @@ pypi-pycryptodomex
 pypi-pycups
 pypi-pycurl
 pypi-pydantic
-pypi-pydata_sphinx_theme
+pypi-pydantic_core
 pypi-pydispatcher
 pypi-pydocstyle
 pypi-pydot
@@ -4272,11 +4274,11 @@ pypi-pyicu
 pypi-pyjwt
 pypi-pylev
 pypi-pylint
-pypi-pyls_black
 pypi-pymdown_extensions
 pypi-pynacl
 pypi-pynetbox
 pypi-pynsist
+pypi-pynvml
 pypi-pyomo
 pypi-pyopengl
 pypi-pyopenssl
@@ -4337,9 +4339,6 @@ pypi-python_debian
 pypi-python_dotenv
 pypi-python_install
 pypi-python_json_logger
-pypi-python_jsonrpc_server
-pypi-python_language_server
-pypi-python_levenshtein
 pypi-python_lsp_black
 pypi-python_lsp_jsonrpc
 pypi-python_lsp_server
@@ -4359,7 +4358,6 @@ pypi-pywavelets
 pypi-pywbem
 pypi-pywinrm
 pypi-pyxattr
-pypi-pyxdameraulevenshtein
 pypi-pyxdg
 pypi-pyyaml_env_tag
 pypi-pyzmq
@@ -4375,6 +4373,7 @@ pypi-readtime
 pypi-recommonmark
 pypi-referencing
 pypi-regex
+pypi-regress
 pypi-reportlab
 pypi-repoze.lru
 pypi-requests
@@ -4431,15 +4430,13 @@ pypi-send2trash
 pypi-sentencepiece
 pypi-sentinels
 pypi-sentry_sdk
-pypi-seqdiag
 pypi-serpent
 pypi-setproctitle
 pypi-setuptools
-pypi-setuptools_git_ls_files
+pypi-setuptools_changelog_shortener
 pypi-setuptools_git_versioning
 pypi-setuptools_rust
 pypi-setuptools_scm
-pypi-setuptools_scm_git_archive
 pypi-sh
 pypi-shapely
 pypi-shellingham
@@ -4472,6 +4469,7 @@ pypi-sphinx_togglebutton
 pypi-sphinxcontrib.jquery
 pypi-sphinxcontrib_apidoc
 pypi-sphinxcontrib_applehelp
+pypi-sphinxcontrib_asyncio
 pypi-sphinxcontrib_bibtex
 pypi-sphinxcontrib_blockdiag
 pypi-sphinxcontrib_devhelp
@@ -4486,7 +4484,6 @@ pypi-sphinxcontrib_plantuml
 pypi-sphinxcontrib_programoutput
 pypi-sphinxcontrib_qthelp
 pypi-sphinxcontrib_redoc
-pypi-sphinxcontrib_seqdiag
 pypi-sphinxcontrib_serializinghtml
 pypi-sphinxcontrib_svg2pdfconverter
 pypi-sphinxcontrib_websupport
@@ -4496,7 +4493,6 @@ pypi-sqlalchemy
 pypi-sqlparse
 pypi-sshtunnel
 pypi-stack_data
-pypi-statsmodels
 pypi-storops
 pypi-strictyaml
 pypi-subprocess_tee
@@ -4522,7 +4518,6 @@ pypi-three_merge
 pypi-tifffile
 pypi-tinycss2
 pypi-tldextract
-pypi-tokenizers
 pypi-toml
 pypi-tomli
 pypi-tomli_w
@@ -4554,6 +4549,7 @@ pypi-types_ipaddress
 pypi-types_jsonschema
 pypi-types_mock
 pypi-types_psutil
+pypi-types_pycurl
 pypi-types_pyopenssl
 pypi-types_pyrfc3339
 pypi-types_python_dateutil
@@ -4600,6 +4596,7 @@ pypi-vsts_cd_manager
 pypi-waitress
 pypi-warlock
 pypi-watchdog
+pypi-wbdata
 pypi-wcmatch
 pypi-wcwidth
 pypi-webcolors
@@ -4612,6 +4609,7 @@ pypi-werkzeug
 pypi-wheel
 pypi-widgetsnbextension
 pypi-wikipedia
+pypi-wordcloud
 pypi-wordfreq
 pypi-wrapt
 pypi-wsgiproxy2
@@ -4668,7 +4666,6 @@ pypi-zope.security
 pypi-zope.testing
 pypi-zope.testrunner
 pypi-zopfli
-pyside2-setup
 python
 python-digitalocean
 python-distutils-extra
@@ -4692,6 +4689,7 @@ pyudev
 qalculate-gtk
 qatlib
 qbittorrent
+qca
 qca-qt5
 qcoro
 qemu
@@ -4706,10 +4704,44 @@ qscintilla
 qsstv
 qstylizer
 qt3d
+qt5compat
 qt5ct
+qt63d
+qt6activeqt
 qt6base
+qt6charts
+qt6connectivity
+qt6datavis3d
+qt6declarative
+qt6doc
+qt6grpc
+qt6httpserver
+qt6imageformats
+qt6languageserver
+qt6lottie
+qt6multimedia
+qt6networkauth
+qt6positioning
+qt6quick3d
+qt6quick3dphysics
+qt6quickeffectmaker
+qt6quicktimeline
+qt6remoteobjects
+qt6scxml
+qt6sensors
+qt6serialbus
+qt6serialport
+qt6shadertools
+qt6speech
 qt6svg
 qt6tools
+qt6translations
+qt6virtualkeyboard
+qt6wayland
+qt6webchannel
+qt6webengine
+qt6websockets
+qt6webview
 qtbase
 qtcanvas3d
 qtcharts
@@ -4756,6 +4788,7 @@ rapidjson
 raptor2
 rasqal
 rclone
+rdfind
 rdma-core
 re2
 re2c
@@ -4765,7 +4798,6 @@ recode
 redis-native
 redis2-nginx-module
 redland
-redshift
 redsocks
 requests-ntlm
 rest
@@ -4836,8 +4868,8 @@ simplescreenrecorder
 sip
 slang
 slirp4netns
+sluice
 slurm
-smartcols
 smartmontools
 smemstat
 snappy
@@ -4923,6 +4955,7 @@ tbb
 tcl
 tcpdump
 tdb
+tecla
 telemetrics-client
 telepathy-glib
 telepathy-qt
@@ -5015,7 +5048,6 @@ vkd3d
 vlc
 volume_key
 vpnc
-vpp
 vsqlite
 vte
 waffle
@@ -5049,6 +5081,7 @@ x11perf
 x11vnc
 x264
 x265
+x86-simd-sort
 xapian-core
 xastir
 xauth
@@ -5064,6 +5097,7 @@ xdg-desktop-portal
 xdg-desktop-portal-gnome
 xdg-desktop-portal-gtk
 xdg-desktop-portal-kde
+xdg-desktop-portal-wlr
 xdg-user-dirs
 xdg-user-dirs-gtk
 xdg-utils
@@ -5136,6 +5170,7 @@ xwayland
 xwd
 xwdrun
 xwininfo
+xxHash
 xz
 yajl
 yakuake
@@ -5150,8 +5185,6 @@ ytnef
 zabbix
 zathura
 zathura-pdf-poppler
-zeek
-zeek-af_packet-plugin
 zenity
 zeroconf-ioslave
 zimg

vendor.py

@@ -97,8 +97,8 @@ def update_cargo_sources(name, tag):
     with open('Makefile', encoding='utf8') as mfile:
         for line in mfile.readlines():
             if line.startswith('ARCHIVES'):
-                if re.match(archive_match + '[a-zA-Z0-9_\-.]+\.tar\.xz', line):
-                    new_archives = re.sub(archive_match + '[a-zA-Z0-9_\-.]+\.tar\.xz',
+                if re.match(archive_match + r'[a-zA-Z0-9_\-.]+\.tar\.xz', line):
+                    new_archives = re.sub(archive_match + r'[a-zA-Z0-9_\-.]+\.tar\.xz',
                                           f"{archive_match}-{tag}.tar.xz\n", line)
                 else:
                     new_archives = f"ARCHIVES = {archive_match}-{tag}.tar.xz ./vendor\n"