Update packages file for version 40100

Signed-off-by: clrbuilder <clrbuilder@intel.com>

Makefile.toplevel

@@ -126,11 +126,17 @@ endif
 pull: ${PULL_PKGS}
 
 #help clean-pkgs-dir: For packages that are no longer present in the distro,
-#help removes the associated package repos from the ./packages tree
+#help removes the associated package repos from the ./packages tree and stores
+#help it in packages_old. If it already exists in packages_old, skip it.
 clean-pkgs-dir: $(PACKAGES_FILE)
 	@for p in ${PKGS_ORPHANED}; do \
-		echo "Removing $$p from packages, it is no longer in common/packages."; \
-		rm -rf packages/$$p; \
+		mkdir -p packages_old; \
+		if [ -d "packages_old/$$p" ]; then \
+			echo "packages_old/$$p already exists, not touching it"; \
+		else \
+			echo "Moving $$p from packages to packages_old, as it is no longer in common/packages."; \
+			mv packages/$$p packages_old/$$p; \
+		fi; \
 	done
 	@echo "packages directory cleaned";
 

packages

@@ -126,6 +126,7 @@ R-NMOF
 R-PKI
 R-ParamHelpers
 R-PerformanceAnalytics
+R-QuickJSR
 R-R.cache
 R-R.methodsS3
 R-R.oo
@@ -997,6 +998,7 @@ R-winch
 R-withr
 R-wk
 R-worrms
+R-writexl
 R-xfun
 R-xgboost
 R-xml2
@@ -1187,6 +1189,7 @@ buildreq-meson
 buildreq-nginx
 buildreq-php
 buildreq-qmake
+buildreq-qt6
 buildreq-scons
 buildx
 byobu
@@ -1207,6 +1210,7 @@ cantarell-fonts
 cantata
 cantor
 capnproto
+capslock
 capstone
 caribou
 casync
@@ -1905,6 +1909,7 @@ kimap
 kinfocenter
 kinit
 kio
+kio-admin
 kio-extras
 kirigami2
 kitemmodels
@@ -2092,7 +2097,10 @@ libdatrie
 libdazzle
 libdbusmenu
 libdbusmenu-qt
+libdecor
 libdeps
+libdex
+libdisplay-info
 libdmx
 libdnf
 libdrm
@@ -2124,6 +2132,7 @@ libftdi1
 libgcrypt
 libgd
 libgdata
+libgedit-amtk
 libgee
 libgeotiff
 libgit2
@@ -2213,6 +2222,7 @@ libopenzwave
 liborcus
 libosinfo
 libpagemaker
+libpanel
 libpcap
 libpciaccess
 libpeas
@@ -2450,6 +2460,7 @@ mosquitto
 motd-update
 motif
 mozjs102
+mozjs115
 mozjs91
 mpc
 mpfr
@@ -2575,7 +2586,6 @@ openjpeg
 openldap
 openmpi
 openpace
-openscad
 openshot-qt
 opensm
 openssh
@@ -2596,6 +2606,7 @@ ostree
 otp
 oxygen
 oxygen-icons5
+oxygen-sounds
 p11-kit
 p7zip
 pacrunner
@@ -2768,6 +2779,7 @@ perl-Crypt-Rijndael
 perl-Crypt-SSLeay
 perl-Crypt-URandom
 perl-Curses
+perl-DBD-MariaDB
 perl-DBD-Pg
 perl-DBD-SQLite
 perl-DBD-SQLite2
@@ -3866,7 +3878,7 @@ pypi-flake8
 pypi-flake8_blind_except
 pypi-flake8_class_newline
 pypi-flake8_docstrings
-pypi-flake8_import_order
+pypi-flake8_isort
 pypi-flaky
 pypi-flask
 pypi-flatbuffers
@@ -3953,6 +3965,7 @@ pypi-hyperframe
 pypi-hyperlink
 pypi-hypothesis
 pypi-icalendar
+pypi-icecream
 pypi-identify
 pypi-idna
 pypi-idna_ssl
@@ -4021,7 +4034,6 @@ pypi-jupyter_console
 pypi-jupyter_core
 pypi-jupyter_events
 pypi-jupyter_lsp
-pypi-jupyter_nbgallery
 pypi-jupyter_packaging
 pypi-jupyter_server
 pypi-jupyter_server_fileid
@@ -4031,7 +4043,6 @@ pypi-jupyter_server_ydoc
 pypi-jupyter_sphinx
 pypi-jupyter_ydoc
 pypi-jupyterlab
-pypi-jupyterlab_launcher
 pypi-jupyterlab_link_share
 pypi-jupyterlab_pygments
 pypi-jupyterlab_server
@@ -4053,6 +4064,7 @@ pypi-lazy
 pypi-lazy_loader
 pypi-lazy_object_proxy
 pypi-ldap3
+pypi-levenshtein
 pypi-libarchive_c
 pypi-libevdev
 pypi-license_expression
@@ -4136,7 +4148,6 @@ pypi-nocaselist
 pypi-nodeenv
 pypi-nose
 pypi-nose_timer
-pypi-notebook
 pypi-notebook_shim
 pypi-numpoly
 pypi-numpy
@@ -4339,7 +4350,6 @@ pypi-python_install
 pypi-python_json_logger
 pypi-python_jsonrpc_server
 pypi-python_language_server
-pypi-python_levenshtein
 pypi-python_lsp_black
 pypi-python_lsp_jsonrpc
 pypi-python_lsp_server
@@ -4706,10 +4716,44 @@ qscintilla
 qsstv
 qstylizer
 qt3d
+qt5compat
 qt5ct
+qt63d
+qt6activeqt
 qt6base
+qt6charts
+qt6connectivity
+qt6datavis3d
+qt6declarative
+qt6doc
+qt6grpc
+qt6httpserver
+qt6imageformats
+qt6languageserver
+qt6lottie
+qt6multimedia
+qt6networkauth
+qt6positioning
+qt6quick3d
+qt6quick3dphysics
+qt6quickeffectmaker
+qt6quicktimeline
+qt6remoteobjects
+qt6scxml
+qt6sensors
+qt6serialbus
+qt6serialport
+qt6shadertools
+qt6speech
 qt6svg
 qt6tools
+qt6translations
+qt6virtualkeyboard
+qt6wayland
+qt6webchannel
+qt6webengine
+qt6websockets
+qt6webview
 qtbase
 qtcanvas3d
 qtcharts
@@ -4923,6 +4967,7 @@ tbb
 tcl
 tcpdump
 tdb
+tecla
 telemetrics-client
 telepathy-glib
 telepathy-qt
@@ -5064,6 +5109,7 @@ xdg-desktop-portal
 xdg-desktop-portal-gnome
 xdg-desktop-portal-gtk
 xdg-desktop-portal-kde
+xdg-desktop-portal-wlr
 xdg-user-dirs
 xdg-user-dirs-gtk
 xdg-utils