Update help comment for clean-pkgs-dir

Signed-off-by: William Douglas <william.douglas@intel.com>

Makefile.toplevel

@@ -126,11 +126,17 @@ endif
 pull: ${PULL_PKGS}
 
 #help clean-pkgs-dir: For packages that are no longer present in the distro,
-#help removes the associated package repos from the ./packages tree
+#help removes the associated package repos from the ./packages tree and stores
+#help it in packages_old. If it already exists in packages_old, skip it.
 clean-pkgs-dir: $(PACKAGES_FILE)
 	@for p in ${PKGS_ORPHANED}; do \
-		echo "Removing $$p from packages, it is no longer in common/packages."; \
-		rm -rf packages/$$p; \
+		mkdir -p packages_old; \
+		if [ -d "packages_old/$$p" ]; then \
+			echo "packages_old/$$p already exists, not touching it"; \
+		else \
+			echo "Moving $$p from packages to packages_old, as it is no longer in common/packages."; \
+			mv packages/$$p packages_old/$$p; \
+		fi; \
 	done
 	@echo "packages directory cleaned";
 

packages

@@ -3,6 +3,7 @@ Botan
 CGAL
 CGNS
 CUnit
+CalcMySky
 Coin
 CopyQ
 DML
@@ -38,12 +39,14 @@ OpenColorIO
 OpenIPMI
 OpenSC
 OpenSP
-Pacemaker
+PDAL
 PyMySQL
 PyQt5
 PySocks
 PyYAML
 QAT_engine
+QGIS
+QXlsx
 R
 R-AER
 R-ATR
@@ -123,6 +126,7 @@ R-NMOF
 R-PKI
 R-ParamHelpers
 R-PerformanceAnalytics
+R-QuickJSR
 R-R.cache
 R-R.methodsS3
 R-R.oo
@@ -542,6 +546,7 @@ R-latticeExtra
 R-lava
 R-lavaan
 R-lazyeval
+R-lbfgsb3c
 R-lda
 R-leaflet
 R-leaflet.providers
@@ -668,6 +673,7 @@ R-partitions
 R-party
 R-partykit
 R-patchwork
+R-patrick
 R-pbapply
 R-pbdZMQ
 R-pbivnorm
@@ -736,6 +742,7 @@ R-psy
 R-psych
 R-psychotools
 R-purrr
+R-purrrlyr
 R-pvclust
 R-pwt
 R-pwt8
@@ -780,6 +787,7 @@ R-rematch2
 R-remote
 R-remotes
 R-rentrez
+R-renv
 R-repr
 R-reprex
 R-repurrrsive
@@ -1016,8 +1024,10 @@ SDL_image
 SDL_mixer
 SDL_net
 SDL_ttf
+SFCGAL
 SFML
 SPIRV-Cross
+SPIRV-Headers
 SPIRV-Tools
 SVT-AV1
 SVT-HEVC
@@ -1179,6 +1189,7 @@ buildreq-nginx
 buildreq-php
 buildreq-qmake
 buildreq-scons
+buildx
 byobu
 bz2file
 bzip2
@@ -1209,6 +1220,7 @@ cgdb
 cgit
 check
 cheese
+chirp
 chrony
 chrpath
 cifs-utils
@@ -1226,6 +1238,7 @@ clr-boot-manager
 clr-bundle-icons
 clr-bundle-screenshots
 clr-bundles
+clr-check-perl-modules
 clr-debug-info
 clr-desktop-defaults
 clr-elf-replace
@@ -1274,6 +1287,7 @@ compat-babeltrace-one
 compat-cairomm-soname10
 compat-codec2-soname1
 compat-enchant-soname1
+compat-ffmpeg-4.4
 compat-fuse-soname2
 compat-gcc-10
 compat-gcr-soname1
@@ -1287,10 +1301,9 @@ compat-libsigc++-soname20
 compat-libsoup-soname-24
 compat-libva-soname1
 compat-libvpx-soname7
-compat-lua-52
-compat-lua-53
 compat-pangomm-soname14
 compat-protobuf-soname29
+compat-re2-soname10
 compat-readline-soname5
 compat-tiff-soname5
 component
@@ -1311,6 +1324,7 @@ cov-core
 cpio
 cppcheck
 cppunit
+cpufetch
 cpuid
 cpuloadgen
 cracklib
@@ -1361,7 +1375,6 @@ directx-headers
 direwolf
 dist-pam-configs
 dkms
-dlm
 dlt-daemon
 dmap2gcode
 dmenu
@@ -1491,6 +1504,7 @@ freeipmi
 freetype
 fribidi
 fritzing-app
+frozen
 fs
 fsarchiver
 fsearch
@@ -1530,9 +1544,7 @@ geos
 gettext
 gexiv2
 gflags
-gftp
 gh
-ghc
 ghostscript
 gi-docgen
 giflib
@@ -1627,6 +1639,7 @@ gpgme
 gphoto2
 gpm
 gpredict
+gpsbabel
 gpsd
 gptfdisk
 gramps
@@ -1636,6 +1649,7 @@ grantleetheme
 graphene
 graphite
 graphviz
+grass
 grep
 grig
 grilo
@@ -1726,6 +1740,7 @@ iio-sensor-proxy
 imapfilter
 imlib2
 indent
+indi
 inetutils
 inih
 iniparse
@@ -1733,6 +1748,7 @@ init-rdahead
 inkscape
 innoextract
 inotify-tools
+input-leap
 intel-cmt-cat
 intel-gmmlib
 intel-hybrid-driver
@@ -1890,6 +1906,7 @@ kimap
 kinfocenter
 kinit
 kio
+kio-admin
 kio-extras
 kirigami2
 kitemmodels
@@ -1949,7 +1966,6 @@ kquickcharts
 krb5
 krdc
 kreversi
-krita
 kronosnet
 kross
 kruler
@@ -2038,6 +2054,7 @@ libaccounts-qt
 libadwaita
 libaio
 libao
+libaom
 libappindicator
 libarchive
 libass
@@ -2186,12 +2203,14 @@ libnice
 libnl
 libnma
 libnotify
+libnova
 libnsl
 libnumbertext
 libnvme
 liboauth
 libodfgen
 libogg
+libopenmpt
 libopenzwave
 liborcus
 libosinfo
@@ -2327,8 +2346,6 @@ linuxptp
 lksctp-tools
 lldpd
 llvm
-llvm11
-llvm12
 llvm14
 llvm15
 lm-sensors
@@ -2467,7 +2484,6 @@ nasm
 nautilus
 ncdu
 ncurses
-ncurses-compat
 ndctl
 ndpi
 neofetch
@@ -2488,6 +2504,7 @@ newt
 nfs-utils
 nftables
 nghttp2
+nghttp3
 nginx
 nginx-mainline
 nginx-rtmp-module
@@ -2546,7 +2563,6 @@ open-iscsi
 open-isns
 open-lldp
 open-vm-tools
-openQA
 openal-soft
 openblas
 openbox
@@ -2557,8 +2573,6 @@ opencv
 openexr
 openjade
 openjdk
-openjdk11
-openjdk13
 openjpeg
 openldap
 openmpi
@@ -2584,9 +2598,11 @@ ostree
 otp
 oxygen
 oxygen-icons5
+oxygen-sounds
 p11-kit
 p7zip
 pacrunner
+pagemon
 paho.mqtt.c
 paho.mqtt.cpp
 palapeli
@@ -2599,6 +2615,7 @@ parallel
 parley
 parted
 pass
+passwdqc
 patch
 patchelf
 patchutils
@@ -2610,7 +2627,6 @@ pcmanfm
 pcp
 pcre
 pcre2
-pcs
 pcsc-lite
 pcsc-tools
 pdns
@@ -3254,6 +3270,7 @@ perl-Sub-Exporter
 perl-Sub-Exporter-ForMethods
 perl-Sub-Exporter-Progressive
 perl-Sub-Identify
+perl-Sub-Infix
 perl-Sub-Info
 perl-Sub-Install
 perl-Sub-Name
@@ -3447,6 +3464,7 @@ perl-latest
 perl-libwww-perl
 perl-libxml-perl
 perl-local-lib
+perl-match-simple
 perl-multidimensional
 perl-namespace-autoclean
 perl-namespace-clean
@@ -3565,6 +3583,7 @@ popt
 portaudio
 portmidi
 postfix
+postgis
 postgresql
 potrace
 powerdevil
@@ -3645,6 +3664,7 @@ pypi-asttokens
 pypi-astunparse
 pypi-asv
 pypi-async_generator
+pypi-async_lru
 pypi-async_timeout
 pypi-asyncssh
 pypi-asynctest
@@ -3674,6 +3694,7 @@ pypi-backports.ssl_match_hostname
 pypi-bash_kernel
 pypi-bashlex
 pypi-bcrypt
+pypi-beartype
 pypi-beautifulsoup4
 pypi-beniget
 pypi-billiard
@@ -3688,6 +3709,7 @@ pypi-blinker
 pypi-blivet
 pypi-blockdiag
 pypi-bokeh
+pypi-boolean.py
 pypi-booleanoperations
 pypi-boto
 pypi-bowler
@@ -3904,11 +3926,13 @@ pypi-grpcio_tools
 pypi-gssapi
 pypi-gsutil
 pypi-gtts_token
+pypi-gunicorn
 pypi-h11
 pypi-h2
 pypi-h5py
 pypi-hammock
 pypi-hatch_fancy_pypi_readme
+pypi-hatch_jupyter_builder
 pypi-hatch_nodejs_version
 pypi-hatch_requirements_txt
 pypi-hatch_vcs
@@ -3993,11 +4017,13 @@ pypi-jsonpatch
 pypi-jsonpickle
 pypi-jsonpointer
 pypi-jsonschema
+pypi-jsonschema_specifications
 pypi-jupyter_cache
 pypi-jupyter_client
 pypi-jupyter_console
 pypi-jupyter_core
 pypi-jupyter_events
+pypi-jupyter_lsp
 pypi-jupyter_nbgallery
 pypi-jupyter_packaging
 pypi-jupyter_server
@@ -4032,6 +4058,7 @@ pypi-lazy_object_proxy
 pypi-ldap3
 pypi-libarchive_c
 pypi-libevdev
+pypi-license_expression
 pypi-lightning_utilities
 pypi-linkchecker
 pypi-linkify_it_py
@@ -4128,8 +4155,10 @@ pypi-opt_einsum
 pypi-ordered_set
 pypi-ouimeaux
 pypi-outcome
+pypi-overrides
 pypi-ovirt_imageio
 pypi-packaging
+pypi-paginate
 pypi-paho_mqtt
 pypi-pandocfilters
 pypi-parameterized
@@ -4345,7 +4374,9 @@ pypi-rapidfuzz_capi
 pypi-rcssmin
 pypi-rdflib
 pypi-readme_renderer
+pypi-readtime
 pypi-recommonmark
+pypi-referencing
 pypi-regex
 pypi-reportlab
 pypi-repoze.lru
@@ -4376,6 +4407,7 @@ pypi-rjsmin
 pypi-rlpycairo
 pypi-rope
 pypi-routes
+pypi-rpds_py
 pypi-rpm_py_installer
 pypi-rpmfile
 pypi-rsa
@@ -4383,6 +4415,7 @@ pypi-rtree
 pypi-ruamel.yaml
 pypi-ruamel.yaml.clib
 pypi-s3transfer
+pypi-safetensors
 pypi-salib
 pypi-sanic_routing
 pypi-scikit_build
@@ -4510,6 +4543,7 @@ pypi-trimesh
 pypi-trio
 pypi-trio_websocket
 pypi-trove_classifiers
+pypi-truststore
 pypi-ttp
 pypi-twine
 pypi-typed_ast
@@ -4586,6 +4620,7 @@ pypi-wrapt
 pypi-wsgiproxy2
 pypi-wsproto
 pypi-wurlitzer
+pypi-wxPython
 pypi-xcffib
 pypi-xgboost
 pypi-xmldiff
@@ -4673,7 +4708,6 @@ qrencode
 qscintilla
 qsstv
 qstylizer
-qt-creator
 qt3d
 qt5ct
 qt6base
@@ -4834,7 +4868,7 @@ spice-vdagent
 sqlite-autoconf
 squashfs-tools
 squid
-sshfs
+srt
 sshpass
 sshuttle
 ssocr
@@ -4859,6 +4893,7 @@ sundials
 supertuxkart
 suricata
 svgpart
+svxlink
 sway
 swaybg
 swayidle
@@ -4871,6 +4906,7 @@ swupd-probe
 swupd-search
 sxiv
 sympy
+syncthing
 syndication
 synergy
 syntax-highlighting
@@ -4968,6 +5004,7 @@ vala
 valgrind
 valijson
 vbox-integration
+vid.stab
 vifm
 vim
 vim-fugitive
@@ -4988,6 +5025,7 @@ waffle
 wavpack
 wayland
 wayland-protocols
+waypipe
 wcslib
 webkitgtk
 webkitgtk60
@@ -5012,6 +5050,8 @@ wslu
 wxWidgets
 x11perf
 x11vnc
+x264
+x265
 xapian-core
 xastir
 xauth
@@ -5094,6 +5134,7 @@ xss-lock
 xterm
 xtrans
 xvfb-run
+xvidcore
 xwayland
 xwd
 xwdrun
@@ -5116,6 +5157,7 @@ zeek
 zeek-af_packet-plugin
 zenity
 zeroconf-ioslave
+zimg
 zip
 zlib
 znc