Update packages file for version 32040

Signed-off-by: clrbuilder <clrbuilder@intel.com>

packages

@@ -339,6 +339,7 @@ R-drc
 R-dtplyr
 R-dtw
 R-dygraphs
+R-dynamicTreeCut
 R-dynlm
 R-e1071
 R-eRm
@@ -1120,6 +1121,7 @@ bazel
 bc
 bcache-tools
 bcc
+bcftools
 bcrypt
 bdftopcf
 beautifulsoup4
@@ -1218,6 +1220,7 @@ ccid
 cdparanoia
 ceph
 ceph-deploy
+cereal
 certbot
 certifi
 cffi
@@ -1355,9 +1358,6 @@ compat-llvm-soname7
 compat-mariadb-soname18
 compat-mpfr-soname4
 compat-nettle-soname6
-compat-opencv-soname32
-compat-opencv-soname33
-compat-openssl-soname-10
 compat-proj-soname13
 compat-protobuf-soname14
 compat-protobuf-soname15
@@ -1468,6 +1468,7 @@ django_compressor
 dkms
 dldt
 dldt-model-optimizer
+dlib
 dlt-daemon
 dmap2gcode
 dmenu
@@ -1868,6 +1869,7 @@ hostname
 hplip
 html5lib
 htop
+htslib
 httpd
 httplib2
 httpretty
@@ -2040,7 +2042,7 @@ kbreakout
 kbruch
 kcachegrind
 kcalc
-kcalcore
+kcalendarcore
 kcalutils
 kcharselect
 kcmutils
@@ -2350,8 +2352,6 @@ libgee
 libgeotiff
 libgepub
 libgfortran-avx
-libgfortran-compat-soname3
-libgfortran-compat-soname4
 libgit2
 libgit2-glib
 libglade
@@ -2724,6 +2724,7 @@ multimon-ng
 multipath-tools
 mumble
 munch
+munge
 munkres
 muparser
 murrine
@@ -3410,6 +3411,7 @@ nautilus
 nbconvert
 nbformat
 nbsphinx
+nbval
 ncdu
 ncurses
 ncurses-compat
@@ -3925,6 +3927,7 @@ perl-FreezeThaw
 perl-Frontier-RPC
 perl-Future
 perl-Future-IO-ImplBase
+perl-GD
 perl-GD-Barcode
 perl-GIS-Distance
 perl-GSSAPI
@@ -4283,6 +4286,7 @@ perl-Test-FailWarnings
 perl-Test-Fatal
 perl-Test-File
 perl-Test-File-ShareDir-Dist
+perl-Test-Fork
 perl-Test-Identity
 perl-Test-Inter
 perl-Test-LeakTrace
@@ -4983,6 +4987,7 @@ sshpass
 ssocr
 sssd
 ssw
+stacer
 stack
 startup-notification
 statsd
@@ -5057,6 +5062,7 @@ tempora
 tenacity
 tensorboard
 tensorflow
+tensorflow-addons
 tensorflow-estimator
 tensorflow-probability
 tensorflow-serving
@@ -5335,6 +5341,7 @@ yelp-xsl
 ykclient
 ytnef
 zVMCloudConnector
+zabbix
 zake
 zathura
 zathura-pdf-poppler

patchfilter.py

@@ -265,6 +265,8 @@ def main():
     zap_line_in_file_start(".spec", "%description license")
     zap_line_in_file_start(".spec", "%package doc")
     zap_line_in_file_start(".spec", "cp -a ")
+    zap_line_in_file_start(".spec", "cd %{_builddir}/")
+    zap_line_in_file_start(".spec", "export GCC_IGNORE_WERROR=1")
  
     zap_line_in_file_start("b/Makefile", "URL =")
     zap_line_in_file_start("b/Makefile", "PKG_NAME :=")
@@ -287,11 +289,13 @@ def main():
     zap_line_in_file("b/options.conf", "# disable parallelization during build")
     zap_line_in_file("b/options.conf", "broken_parallel_build = false")
     zap_line_in_file("b/options.conf", "# this package is a library compatability package and only ships versioned library files")
+    zap_line_in_file("b/options.conf", "# this package is a library compatibility package and only ships versioned library files")
     zap_line_in_file("b/options.conf", "compat = false")
     zap_line_in_file("b/options.conf", "# set conservative build flags")
     zap_line_in_file("b/options.conf", "conservative_flags = false")
     zap_line_in_file("b/options.conf", "# dev package requires the extras to be installed")
     zap_line_in_file("b/options.conf", "dev_requires_extras = false")
+    zap_line_in_file("b/options.conf", "nodebug = false")
     zap_line_in_file("b/options.conf", "# pass -ffast-math to compiler")
     zap_line_in_file("b/options.conf", "fast-math = false")
     zap_line_in_file("b/options.conf", "# optimize build for speed over size")
@@ -321,9 +325,12 @@ def main():
     zap_line_in_file("b/options.conf", "# add clang flags")
     zap_line_in_file("b/options.conf", "use_clang = false")
     zap_line_in_file("b/options.conf", "# configure build for lto")
-    zap_line_in_file("b/options.conf", "use_lto = false")
+    zap_line_in_file("b/options.conf", "use_lto = true")
     zap_line_in_file("b/options.conf", "# require package verification for build")
     zap_line_in_file("b/options.conf", "verify_required = true")
+    zap_line_in_file("b/options.conf", "# do not generate debuginfo for this package")
+    zap_line_in_file("b/options.conf", "nodebug = false")
+    zap_line_in_file("b/options.conf", "domain =")
 
     zap_line_in_file("b/buildreq_add", "# This file contains additional build requirements that did not get")
     zap_line_in_file("b/buildreq_add", "# picked up automatically. One name per line, no whitespace.")
@@ -349,6 +356,8 @@ def main():
     zap_plus_line_in_file("symbols32")
 
     zap_entire_file("b/whatrequires")
+    zap_entire_file("b/versions")
+    zap_entire_file("b/.gitignore")
 
     zap_empty_chunks()